Skip to main content

Table 2 Expression levels for the genes discussed in this paper.

From: Transcriptional effects of CRP* expression in Escherichia coli

Gene

WT G

WT

CRP* G

CRP*

WT G/WT

CRP* G/CRP*

CRP* G/WT G

CRP* G/WT

aceA

1806

3171

2584

1980

0.6

1.3

1.4

0.8

aceE

7646

13291

10053

9167

0.6

1.1

1.3

0.8

acs

56

223

203

386

0.3

0.5

3.6

0.9

aldA

370

2471

937

1613

0.2

0.6

2.5

0.4

argD

44

38

73

158

1.1

0.5

1.7

1.9

asnA

594

1741

1409

1880

0.3

0.8

2.4

0.8

cheR

1588

2315

2311

1007

0.7

2.3

1.5

1.0

cheY

5365

6487

5893

2646

0.8

2.2

1.1

0.9

citF

50

25

306

269

2.0

1.1

6.1

12.2

dhaM

8790

1502

10556

3530

5.9

3.0

1.2

7.0

edd

4178

756

3582

980

5.5

3.7

0.9

4.7

fruA

3105

1289

5777

3659

2.4

1.6

1.9

4.5

fruK

3722

1934

6807

3866

1.9

1.8

1.8

3.5

fumA

956

3284

4013

3738

0.3

1.1

4.2

1.2

gapC

1316

581

2345

2383

2.3

1.0

1.8

4.0

gatD

1560

475

6080

7981

3.3

0.8

3.9

12.8

gatR

1776

786

6106

5039

2.3

1.2

3.4

7.8

gcd

491

467

171

67

1.1

2.5

0.4

0.4

glnP

2682

1037

1108

1374

2.6

0.8

0.4

1.1

glpC

564

8563

5595

13130

0.1

0.4

9.9

0.7

glpF

738

12693

2384

10944

0.1

0.2

3.2

0.2

glpG

1225

895

938

1426

1.4

0.7

0.8

1.1

glpK

360

8374

1579

8395

0.04

0.2

4.4

0.2

glpQ

159

4424

1747

9315

0.04

0.2

11.0

0.4

glpT

54

4285

893

9145

0.01

0.1

16.5

0.2

gltB

3219

2423

3388

1487

1.3

2.3

1.1

1.4

gltD

1881

1282

1829

595

1.5

3.1

1.0

1.4

glyA

1613

3148

3353

3448

0.5

1.0

2.1

1.1

gntK

631

217

670

259

2.9

2.6

1.1

3.1

gntP

87

354

321

799

0.2

0.4

3.7

0.9

gntU

334

98

260

126

3.4

2.1

0.8

2.7

guaB

4670

7698

2558

1733

0.6

1.5

0.6

0.3

ldhA

1823

1281

6014

3669

1.4

1.6

3.3

4.7

maeB

579

1420

1509

1839

0.4

0.8

2.6

1.1

malF

2381

2353

7365

9358

1.0

0.8

3.1

3.1

manZ

3993

2734

12806

9993

1.5

1.3

3.2

4.7

mdh

5878

9397

12603

15821

0.6

0.8

2.1

1.3

mglA

10

592

400

1205

0.02

0.3

40.0

0.7

mglB

38

1376

1529

4340

0.03

0.4

40.3

1.1

nrfE

783

21

531

754

36.5

0.7

0.7

24.7

nrfF

2460

41

1177

2267

59.7

0.5

0.5

28.6

nrfG

611

10

216

435

58.6

0.5

0.4

20.7

pntA

3946

6915

7400

7086

0.6

1.0

1.9

1.1

pntB

1736

2546

3057

3083

0.7

1.0

1.8

1.2

ppsA

247

6026

1325

3494

0.04

0.4

5.4

0.2

proA

2536

2397

13

12

1.1

1.1

0.01

0.01

proB

3589

3092

7

4

1.2

1.9

0.00

0.00

ptsG

13731

3926

16556

5403

3.5

3.1

1.2

4.2

rpsQ

6405

12505

9398

7652

0.5

1.2

1.5

0.8

sdhA

1033

7257

3292

3154

0.1

1.0

3.2

0.5

sdhB

895

5161

2407

2521

0.2

1.0

2.7

0.5

sdhD

556

5466

2568

1980

0.1

1.3

4.6

0.5

serA

2256

956

1638

793

2.4

2.1

0.7

1.7

serC

3904

2365

3230

1738

1.7

1.9

0.8

1.4

srlA

174

4601

313

3037

0.04

0.1

1.8

0.1

sthA

3236

3764

1936

2741

0.9

0.7

0.6

0.5

sucA

3988

8390

4822

4421

0.5

1.1

1.2

0.6

tdcA

74

4064

3412

8483

0.02

0.4

45.9

0.8

tdcB

147

4614

7708

13552

0.03

0.6

52.4

1.7

tdcE

95

397

3932

11414

0.2

0.3

41.4

9.9

tdcG

126

182

3018

14708

0.7

0.2

23.9

16.6

thiC

163

179

212

455

0.9

0.5

1.3

1.2

thiE

136

140

183

412

1.0

0.4

1.4

1.3

thrA

812

2686

1997

1279

0.3

1.6

2.5

0.7

thrB

849

2857

2165

1353

0.3

1.6

2.6

0.8

thrC

783

1722

1594

1378

0.5

1.2

2.0

0.9

tnaA

688

16366

10805

23343

0.04

0.5

15.7

0.7

tnaB

74

3825

1957

9810

0.02

0.2

26.6

0.5

treB

4465

17280

4711

19044

0.3

0.3

1.1

0.3

treC

3007

12164

2606

15416

0.3

0.2

0.9

0.2

Upd

11584

3965

4736

6483

2.9

0.7

0.4

1.2

ymfL

29

56

364

71

0.5

5.1

12.5

6.6

ymfO

114

177

961

137

0.7

7.0

8.4

5.4

  1. Four different conditions were tested: W3110 in LB+glucose medium (WT G), W3110 in LB medium (WT), PC05 in LB+glucose medium (CRP* G), and PC05 in LB medium (CRP*)