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Table 2 The identified reactions that contribute significantly to the predicted maximum NADH production rate

From: Model-driven elucidation of the inherent capacity of Geobacter sulfurreducens for electricity generation

Reaction ID

NADH flux (mmol/gDW/h)

Enzyme

EC. No.

Reaction

Subsystems

Min

Max

AKGD

0

17.73

2-oxoglutarate dehydrogenase

2.3.1.61

[c] : akg + coa + nad --> co2 + nadh + succoa

Central Metabolism

ALAD_L

0

52.77

L-alanine dehydrogenase

1.4.1.1

[c] : ala-L + h2o + nad --> h + nadh + nh4 + pyr

Amino Acid Metabolism

GLUDx

0

52.72

glutamate dehydrogenase (NAD)

1.4.1.3

[c] : glu-L + h2o + nad <==> akg + h + nadh + nh4

Amino Acid Metabolism

GSADH

0

52.77

L-glutamate 5-semialdehyde dehydrogenase

1.2.1.38

[c] : glu5sa + h2o + nad --> glu-L + (2) h + nadh

Amino Acid Metabolism

HDMAT7

-0.00007

52.77

Hexadecanoyl-[acyl-carrier protein]:malonyl-CoA C-acyltransferase

1.3.1.9

[c] : nad + palmACP <==> h + hdeACP + nadh

Fatty Acid Synthesis

ME1x

0

52.77

malic enzyme (NAD)

1.1.1.37

[c] : mal-L + nad --> co2 + nadh + pyr

Central Metabolism

P5CD

0

52.77

1-pyrroline-5-carboxylate dehydrogenase

1.5.1.12

[c] : 1pyr5c + (2) h2o + nad --> glu-L + h + nadh

Amino Acid Metabolism

PDH

0

52.77

pyruvate dehydrogenase

1.2.4.1

[c] : coa + nad + pyr --> accoa + co2 + nadh

Central Metabolism

PGCD

0.0196

52.79

phosphoglycerate dehydrogenase

1.1.1.95

[c] : 3pg + nad --> 3php + h + nadh

Amino Acid Metabolism

TDMAT6

-0.00404

52.77

Tetradecanoyl-[acyl-carrier protein]:malonyl-CoA C-acyltransferase

1.3.1.9

[c] : myrsACP + nad <==> h + nadh + tdeACP

Fatty Acid Synthesis

  1. (The reaction and metabolite abbreviations are listed in the Additional file 2).