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Table 3 The identified reactions that contribute significantly to the predicted maximum NADH production rate

From: Model-driven elucidation of the inherent capacity of Geobacter sulfurreducens for electricity generation

Reaction ID

NADH flux (mmol/gDW/h)

Enzyme

EC. No.

Reaction

Subsystems

Min

Max

NADH producing reactions

    

AKGD

0

35.48

2-oxoglutarate dehydrogenase

2.3.1.61

[c] : akg + coa + nad --> co2 + nadh + succoa

Central Metabolism

ALDD2x

8.855

35.32

aldehyde dehydrogenase (acetaldehyde, NAD)

1.2.1.3

[c] : acald + h2o + nad --> ac + (2) h + nadh

Amino Acid Metabolism

GCCc

4.427

17.66

part of glycine-cleavage complex

1.8.1.4

[c] : dhlpro + nad --> h + lpro + nadh

Amino Acid Metabolism

NADH consuming reactions

    

GAPD

-52.96

-0.04026

glyceraldehyde-3-phosphate dehydrogenase (NAD)

1.2.1.12

[c] : g3p + nad + pi <==> 13dpg + h + nadh

Central Metabolism

GLUSx

-52.92

0

glutamate synthase (NADH2)

1.4.1.14

[c] : akg + gln-L + h + nadh --> (2) glu-L + nad

Amino Acid Metabolism

NADH5

-10.58

0

NADH dehydrogenase (Menaquinone 7 & 2 protons)

1.6.5.3

(3) h[c] + mqn7[c] + nadh[c] --> (2) h[e] + mql7[c] + nad[c]

Energy Metabolism

DET

    

CYOR1m

35.48

35.48

cytochrome-c reductase (menaquinol 7: 1 protons)

1.7.2.2

(2) ficytcc[c] + mql7[c] --> (2) focytcc[c] + h[e] + h[c] + mqn7[c]

Energy Metabolism

  1. (The reaction and metabolite abbreviations are listed in the Additional file 2).