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Table 2 Synthetic CYC1 5-UTR terminal sequences from k 26 to k 38

From: Nucleotides upstream of the Kozak sequence strongly influence gene expression in the yeast S. cerevisiae

ID

MFE (kcal/mol)

Sequence

k 0

-241.21

CACACTAAATTAATA

k 1

-241.21

AAAAAAAAAAAAAAA

k 26

−261.39

GGGGGGGGCGGGGGG

k 27

−247.04

AAAAAAAGCGGGGGG

k 28

−246.41

GGGGGGGAAAAAAAA

k 29

−245.97

AAAAAAAGCGGGGGA

k 30

−244.28

AAAAAAAGCGGGGAG

k 31

−247.46

AAAAAAAGCGGGAGG

k 32

-241.21

GGGGAAAAAAAAAAA

k 33

−241.93

GAGAGAGAAAAAAAA

k 34

−246.59

GGGGGGAAAAAAAAA

k 35

−242.5

GGGGGAAAAAAAAAA

k 36

-241.21

GGGAAAAAAAAAAAA

k 37

-241.21

GGAAAAAAAAAAAAA

k 38

-241.21

GAAAAAAAAAAAAAA

  1. Nucleotides in bold are mutations with respect to k 1 sequence. k 0 is shown for comparison. MFE, minimum free energy, computed in RNAfold