Method | Single-level FBA | OptKnockb |
---|
B. subtilis strain | W168 | LM01c | W168 |
---|
Biomass production | 0.30 | 0.28 | 0.35 |
Acetate exchange | 3.78 | 0.12 | 0.15 |
l-Lactate exchange | 2.00 | 0.00 | 0.00 |
(R,R)-2,3-BD exchange | 0.00 | 2.54 | 2.10 |
- aGlycerol utilization and oxygen consumption were set to 10Â mmol/gCDW/h (see Methods)
- bOptKnock objectives were set for growth coupling with 2,3-BD production. The reactions suggested for gene knockout were: ACKr (ack), PTAr (pta), ACACT1r (mmgA), and G6PDH2r (zwf). This informed the construction of MZ02 strain
- cLM01 was designed to be unable to perform four reactions, namely, ACKr (ack), PTAr (pta), LDH_L (lctE), and ACACT1r (mmgA)