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Fig. 9 | Journal of Biological Engineering

Fig. 9

From: Computational analysis of viable parameter regions in models of synthetic biological systems

Fig. 9

Results of a deterministic simulations performed on the AC-DC circuit model. Blue, red and green represent the concentration of proteins X, Y and Z, respectively. The duration of simulation is 48 h with the initial conditions X=37nM, Y=280nM, Z=280nM. Figure (a) shows the bistable dynamics for a point in the parameter space α=5.91h−1,n=4.16,β=47.35h−1,δm=0.63h−1,δp=1.12h−1,Kda=165.03nM, Kdb=111.2nM, Kdc=101.5nM, Kdd=0.48nM. The initial concentration of protein X is low and Y is high. Through time the concentrations of proteins X and Y balanced at 0 and 400 nM, respectively. Figure (b) shows the oscillating dynamics for the parameter point α=26.26h−1,n=3.82,β=18.14h−1,δm=0.92h−1,δp=1.29h−1,Kda=151.42nM, Kdb=197.61nM, Kdc=41.88nM, Kdd=11.7nM. Proteins X and Z have the same amplitude of 200 nM, while the amplitude of protein Y is around 80 nM. All proteins have the same period of 12 hours

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