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Table 1 The top 10 differentially expressed genes when comparing urban particulate matter treatment and the untreated control group

From: Identification of urban particulate matter-induced disruption of human respiratory mucosa integrity using whole transcriptome analysis and organ-on-a chip

Gene symbol

Description

RNA fold-change

P-value

Upregulated genes

 MT1H

metallothionein 1H

16.13

0.0004

 IL13RA2

interleukin 13 receptor subunit alpha 2

14.92

0.009

 MMP1

matrix metallopeptidase 1

14.31

0.008

 LCE3D

late cornified envelope 3D

14.17

0.034

 IL1R2

interleukin 1 receptor type 2

13.79

0.03

 MT1G

metallothionein 1G

13.39

0.0001

 CXCL8

C-X-C motif chemokine ligand 8

11.20

0.020

 SERPINB2

serpin family B member 2

9.44

0.0008

 CYP1A1

cytochrome P450 family 1 subfamily A member 1

8.97

0.002

 IL1RL1

Interleukin 1 receptor-like 1

8.00

0.008

Downregulated genes

 CALML3

calmodulin like 3

−5.46

0.008

 SESN3

sestrin 3

−4.82

0.0002

 ID3

inhibitor of DNA binding 3, HLH protein

−4.31

0.013

 PALMD

palmdelphin

−3.94

0.012

 AKR1B10

aldo-keto reductase family 1 member B10

− 3.86

0.013

 LFNG

LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

−3.86

0.003

 TREM2

triggering receptor expressed on myeloid cells 2

−3.83

0.002

 HSD17B3

hydroxysteroid 17-beta dehydrogenase 3

−3.70

0.009

 TP53AIP1

tumor protein p53 regulated apoptosis inducing protein 1

−3.64

0.006

 SYT8

synaptotagmin 8

−3.59

0.022