From: Challenges in predicting the evolutionary maintenance of a phage transgene
Notation | Genotype: | Use | Ref |
---|---|---|---|
IJ1133 | E. coli K-12 F -Δ lacX74 thi Δ (mcrC-mrr)102::Tn10 | Host for measuring phage titers and some serial transfers to determine the evolutionary stability of the dsp B transgene in the absence of an extracellular PNAG matrix. | [31] |
BL21 (DE3) | E. coli B Gal -dcm ompT hsdS(r B - m B -) [ λ(DE3)] | Host for protein expression | [32] |
IJ512 | E. coli K12 Δ lacX74 supE44 galK2 galT22 mcrA rfbD1 mcrB1 hsdS3 /F ′lac | Host for selecting T7 carrying T3 gene 1.2 |  |
Δ trxA | JW5856 (Keio Δ trxA::kan) | Host for selection of positive phage recombinants carrying trxA | KEIO [33] |
Δ csrA | E. coli K-12 F -Δ lacU169 Δ csrA::kan | Biofilm host; overproduces PNAG, the substrate for dispersin B | TR1-5 mutant in [34] |
Δ nagZ | JW1083 (Keio Δ nagZ::kan) | Host with low background activity for producing dispersin B protein from phage lysates | KEIO [33] |